BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F06LP1|AL427505
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig667 1766 0.0
>3x_Contig667
Length = 2077
Score = 1766 bits (889), Expect = 0.0
Identities = 929/939 (98%), Gaps = 4/939 (0%)
Strand = Plus / Plus
Query: 1 aatctctttttcccatgccattctgaaacattcgctgttaccgaaatcagtkatctttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1140 aatctctttttcccatgccattctgaaacattcgctgttaccgaaatcagtgatctttag 1199
Query: 61 agtaccatcatgagtgagcagtagattctccggctttaaatctctgtggcaaacgcccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 agtaccatcatgagtgagcagtagattctccggctttaaatctctgtggcaaacgcccat 1259
Query: 121 attatgcatgttaacatcacctgttattagttgttttaaaaagcagttagcttcttggta 180
||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1260 attatgcatgtaaacaacacctgttattagttgttttaaaaagcagtcagcttcttggta 1319
Query: 181 ttctagtttccctgctgcgataatcaaagtgaacaaatcaccacctgagcaatactccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 ttctagtttccctgctgcgataatcaaagtgaacaaatcaccacctgagcaatactccat 1379
Query: 241 cacctcacagtaatcaccctttgcgtcttggaaaagatctagagtttctataatattggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 cacctcacagtaatcaccctttgcgtcttggaaaagatctagagtttctataatattggt 1439
Query: 301 atgcttcaaagatgaagagatgcagaattcagacgtcaacctcttcgaatatttcaccgg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1440 atgcttcaaagatgaagagatgcagaattcagacgtcaa-ctcttcgaatatttcaccgg 1498
Query: 361 attttcagtgggtcttcttctaaattctttaacagcatataaaatttctccactaacgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 attttcagtgggtcttcttctaaattctttaacagcatataaaatttctccactaacgct 1558
Query: 421 ttttaagttcttcttgtgacaaatccgtaccacaccgaa-gaacctttcccgataacttc 479
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1559 ttttaagttcttcttgtgacaaatccgtaccacaccgaaggaacctttcccgataacttc 1618
Query: 480 ctggcatctcccatatttctgcccaaaggtaacagacccatgatgcaatgggttgacagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 ctggcatctcccatatttctgcccaaaggtaacagacccatgatgcaatgggttgacagc 1678
Query: 540 gtcttcaaaattaagcatttttaagtctggttggctttgctcttgttttgtccccagcac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 gtcttcaaaattaagcatttttaagtctggttggctttgctcttgttttgtccccagcac 1738
Query: 600 ttgtgtagccccactataaggataagcagtcccattttgaagttgataagtctcggcaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 ttgtgtagccccactataaggataagcagtcccattttgaagttgataagtctcggcaga 1798
Query: 660 agcggcgtccacttgctttatgagamctgcaaataatgatggtggatcaccggatttcat 719
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1799 agcggcgtccacttgctttatgagacctgcaaataatgatggtggatcaccggatttcat 1858
Query: 720 tgactttatgagtatatccggtacagcagatttggcttcaccacgtaatttttgtgca-c 778
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1859 tgactttatgagtatatccggtacagcagatttggcttcaccacgtaatttttgtgcacc 1918
Query: 779 aagcatatttttaatcatagatcccaacttctcctgtctctttgcatttttcaaatggtg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 aagcatatttttaatcatagatcccaacttctcctgtctctttgcatttttcaaatggtg 1978
Query: 839 ttcatgggt-ccatcctcgtgcaggatgaacctacggtttggattaggacacgtatttgc 897
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 ttcatgggtcccatcctcgtgcaggatgaacctacggtttggattaggacacgtatttgc 2038
Query: 898 agaggatagagtygataagtttgccgttgatgatgcaga 936
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 2039 agaggatagagtcgataagtttgccgttgatgatgcaga 2077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6667
Number of Sequences: 1807
Number of extensions: 6667
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)